Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase | DBR11_05725 | Not Available | Positive | 1389478 - 1390113 | 24373.4 |
| nudix hydrolase | DBR11_05730 | Not Available | Negative | 1390110 - 1390550 | 17113.4 |
| cation diffusion facilitator family transporter | DBR11_05735 | Not Available | Negative | 1390547 - 1391527 | 36422.4 |
| aspartate aminotransferase | DBR11_05740 | Not Available | Positive | 1391718 - 1392857 | 41798.8 |
| hypothetical protein | DBR11_05745 | Not Available | Positive | 1392916 - 1393186 | 10043.3 |
| short-chain dehydrogenase | DBR11_05750 | Not Available | Positive | 1393295 - 1394071 | 28085.2 |
| phytanoyl-coa dioxygenase | DBR11_05755 | Not Available | Positive | 1394323 - 1395129 | 30579.6 |
| prolyl 4-hydroxylase subunit alpha | DBR11_05760 | Not Available | Negative | 1395354 - 1396070 | 27536.2 |
| hypothetical protein | DBR11_05765 | Not Available | Negative | 1396147 - 1396530 | 14838.7 |
| methyltransferase | DBR11_05770 | Not Available | Positive | 1396667 - 1397263 | 22794.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

