Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | DBR11_05265 | Not Available | Negative | 1270020 - 1271393 | 49641.2 |
| aldose epimerase | DBR11_05270 | Not Available | Positive | 1271484 - 1272350 | 33432.5 |
| histidine kinase | DBR11_05275 | Not Available | Positive | 1272411 - 1273598 | 44111.8 |
| malate:quinone oxidoreductase | DBR11_05280 | Not Available | Negative | 1273591 - 1275114 | 56157.5 |
| metallophosphoesterase | DBR11_05285 | Not Available | Positive | 1275322 - 1276878 | 58531.7 |
| cytochrome c peroxidase | DBR11_05290 | Not Available | Positive | 1277381 - 1278682 | 48648.5 |
| s9 family peptidase | DBR11_05295 | Not Available | Positive | 1278898 - 1280787 | 72131.0 |
| sensor histidine kinase | DBR11_05300 | Not Available | Positive | 1280798 - 1282465 | 64327.7 |
| dna-binding response regulator | DBR11_05305 | Not Available | Positive | 1282471 - 1283160 | 26487.3 |
| metallophosphatase | DBR11_05310 | Not Available | Negative | 1283161 - 1284414 | 47302.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

