Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DBR11_05110 | Not Available | Negative | 1227839 - 1228612 | 29030.2 |
| abc transporter permease | DBR11_05115 | Not Available | Negative | 1228620 - 1229426 | 29069.7 |
| rna polymerase subunit sigma-70 | DBR11_05120 | Not Available | Positive | 1229659 - 1230237 | 22459.7 |
| anti-sigma factor | DBR11_05125 | Not Available | Positive | 1230347 - 1231501 | 42717.1 |
| susc/raga family tonb-linked outer membrane protein | DBR11_05130 | Not Available | Positive | 1231760 - 1235143 | 124900.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_05135 | Not Available | Positive | 1235184 - 1236647 | 54279.9 |
| glycoside hydrolase | DBR11_05140 | Not Available | Positive | 1236658 - 1238538 | 70533.7 |
| trehalose hydrolase | DBR11_05150 | Not Available | Positive | 1239706 - 1241991 | 85644.3 |
| alpha-glucan family phosphorylase | DBR11_05155 | Not Available | Negative | 1241988 - 1243634 | 62558.8 |
| 6-carboxytetrahydropterin synthase qued | DBR11_05160 | Not Available | Positive | 1243773 - 1244129 | 13584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

