Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase | DBR11_05060 | Not Available | Negative | 1212899 - 1213756 | 31101.1 |
| hypothetical protein | DBR11_05065 | Not Available | Positive | 1213894 - 1215864 | 75000.2 |
| dna-binding response regulator | DBR11_05070 | Not Available | Positive | 1215924 - 1216598 | 25466.5 |
| hypothetical protein | DBR11_05075 | Not Available | Positive | 1216614 - 1217969 | 51745.0 |
| tolc family protein | DBR11_05080 | Not Available | Positive | 1218086 - 1219381 | 49396.0 |
| efflux transporter periplasmic adaptor subunit | DBR11_05085 | Not Available | Positive | 1219393 - 1220496 | 40520.6 |
| cusa/czca family heavy metal efflux rnd transporter | DBR11_05090 | Not Available | Positive | 1220525 - 1223656 | 116030.0 |
| serine protease | DBR11_05095 | Not Available | Positive | 1223746 - 1225953 | 82228.8 |
| sam-dependent methyltransferase | DBR11_05100 | Not Available | Negative | 1226011 - 1226838 | 30557.1 |
| mce family protein | DBR11_05105 | Not Available | Negative | 1226853 - 1227833 | 35587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

