Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4387 domain-containing protein | C3433_03760 | Not Available | Negative | 789517 - 789834 | 11841.3 |
| 3-methylaspartate ammonia-lyase | C3433_03765 | Not Available | Negative | 789831 - 791201 | 49122.7 |
| methylaspartate ammonia-lyase | C3433_03770 | Not Available | Negative | 791205 - 792446 | 45415.7 |
| methylaspartate mutase subunit e | C3433_03775 | Not Available | Negative | 792446 - 793891 | 52793.3 |
| glutamate mutase | C3433_03780 | Not Available | Negative | 793910 - 795298 | 50551.2 |
| methylaspartate mutase subunit s | C3433_03785 | Not Available | Negative | 795298 - 795747 | 16277.5 |
| cytochrome bd-i ubiquinol oxidase subunit i | C3433_03790 | Not Available | Positive | 796965 - 798533 | 58385.6 |
| cytochrome d ubiquinol oxidase subunit ii | C3433_03795 | Not Available | Positive | 798549 - 799688 | 42294.2 |
| cytochrome bd-i oxidase subunit cydx | C3433_03800 | Not Available | Positive | 799703 - 799816 | 4013.84 |
| cyd operon protein ybge | C3433_03805 | Not Available | Positive | 799816 - 800109 | 10988.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

