Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase | C3433_03455 | Not Available | Positive | 728076 - 729743 | 63464.2 |
| chitoporin | C3433_03460 | Not Available | Positive | 730304 - 731710 | 52712.7 |
| hypothetical protein | C3433_03465 | Not Available | Positive | 731760 - 732092 | 12169.5 |
| citrate-proton symporter | C3433_03470 | Not Available | Negative | 732144 - 733439 | 47220.7 |
| tricarballylate utilization protein tcub | C3433_03475 | Not Available | Negative | 733493 - 734632 | 41762.7 |
| tricarballylate dehydrogenase | C3433_03480 | Not Available | Negative | 734619 - 736022 | 50959.4 |
| lysr family transcriptional regulator | C3433_03485 | Not Available | Negative | 736120 - 737046 | 33451.9 |
| transcriptional repressor | C3433_03490 | Not Available | Negative | 737174 - 737620 | 16767.8 |
| ryhb-regulated fur leader peptide | C3433_03495 | Not Available | Negative | 737613 - 737699 | 3023.6 |
| flavodoxin flda | C3433_03500 | Not Available | Negative | 737910 - 738485 | 21641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

