Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_03250 | Not Available | Negative | 692316 - 692579 | 9786.82 |
| serine-type d-ala-d-ala carboxypeptidase | C3433_03255 | Not Available | Negative | 692686 - 693897 | 44413.4 |
| endolytic peptidoglycan transglycosylase rlpa | C3433_03260 | Not Available | Negative | 694040 - 695143 | 38099.8 |
| rod shape-determining protein roda | C3433_03265 | Not Available | Negative | 695154 - 696266 | 40586.7 |
| penicillin-binding protein 2 | C3433_03270 | Not Available | Negative | 696269 - 698170 | 70798.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C3433_03275 | Not Available | Negative | 698201 - 698668 | 17372.1 |
| ribosome silencing factor rsfs | C3433_03280 | Not Available | Negative | 698672 - 698989 | 11625.0 |
| alpha-ribazole phosphatase | C3433_03285 | Not Available | Negative | 699244 - 699855 | 23181.6 |
| threonine-phosphate decarboxylase | C3433_03290 | Not Available | Positive | 699952 - 701046 | 40862.9 |
| nicotinate-nucleotide adenylyltransferase | C3433_03295 | Not Available | Negative | 701021 - 701662 | 24412.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

