Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilz | C3433_02895 | Not Available | Positive | 612265 - 612960 | 26705.0 |
| luxr family transcriptional regulator | C3433_02900 | Not Available | Positive | 612976 - 613563 | 22386.5 |
| eal domain-containing protein | C3433_02905 | Not Available | Positive | 613665 - 614432 | 28405.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | C3433_02910 | Not Available | Negative | 614577 - 623909 | 317631.0 |
| dna-binding response regulator | C3433_02915 | Not Available | Negative | 624104 - 624682 | 21776.6 |
| dna repair protein | C3433_02920 | Not Available | Negative | 625300 - 626475 | 45801.1 |
| hypothetical protein | C3433_02925 | Not Available | Positive | 626775 - 627860 | 39022.8 |
| phenylalanine transporter | C3433_02930 | Not Available | Positive | 628007 - 629401 | 51024.6 |
| mfs transporter | C3433_02935 | Not Available | Positive | 629566 - 630807 | 45311.5 |
| ap endonuclease | C3433_02940 | Not Available | Positive | 630823 - 631851 | 38572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

