Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel mscm | C3433_02535 | Not Available | Positive | 536557 - 539871 | 123187.0 |
| glutamate/gamma-aminobutyrate family transporter yjem | C3433_02540 | Not Available | Negative | 539966 - 541468 | 54669.1 |
| elongation factor p--(r)-beta-lysine ligase | C3433_02545 | Not Available | Negative | 541683 - 542660 | 36965.1 |
| fumarate reductase (quinol) flavoprotein subunit | C3433_02550 | Not Available | Positive | 542985 - 544775 | 65398.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | C3433_02555 | Not Available | Positive | 544768 - 545502 | 27158.5 |
| fumarate reductase subunit frdc | C3433_02560 | Not Available | Positive | 545513 - 545908 | 14880.8 |
| fumarate reductase subunit frdd | C3433_02565 | Not Available | Positive | 545922 - 546278 | 13060.7 |
| lysr family transcriptional regulator | C3433_02570 | Not Available | Negative | 546320 - 547195 | 32446.2 |
| cmy family class c beta-lactamase | C3433_02575 | Not Available | Positive | 547327 - 548472 | 41870.4 |
| hypothetical protein | C3433_02580 | Not Available | Positive | 548566 - 549099 | 19960.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

