Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1107 domain-containing protein | C3433_02230 | Not Available | Negative | 483599 - 483805 | 8088.21 |
| ytfj family protein | C3433_02240 | Not Available | Positive | 484133 - 484690 | 20509.7 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C3433_02245 | Not Available | Negative | 484680 - 485420 | 27195.5 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | C3433_02250 | Not Available | Positive | 485609 - 487552 | 70704.8 |
| transcriptional regulator | C3433_02255 | Not Available | Negative | 487600 - 487980 | 14106.9 |
| nad(p)-dependent oxidoreductase | C3433_02260 | Not Available | Positive | 488069 - 488917 | 29191.5 |
| arac family transcriptional regulator | C3433_02265 | Not Available | Positive | 488999 - 489823 | 31826.8 |
| eama family transporter | C3433_02270 | Not Available | Positive | 489899 - 490867 | 35079.5 |
| methyl-accepting chemotaxis protein ii | C3433_02275 | Not Available | Negative | 490963 - 492612 | 58958.0 |
| iron-sulfur cluster repair protein ytfe | C3433_02280 | Not Available | Positive | 492857 - 493519 | 24914.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

