Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | C3433_01930 | Not Available | Positive | 416485 - 417996 | 54876.0 |
| dna polymerase iii subunit chi | C3433_01935 | Not Available | Positive | 418134 - 418577 | 16504.4 |
| valine--trna ligase | C3433_01940 | Not Available | Positive | 418577 - 421432 | 108165.0 |
| duf898 domain-containing protein | C3433_01945 | Not Available | Negative | 421556 - 422746 | 43929.3 |
| gnat family n-acetyltransferase | C3433_01950 | Not Available | Positive | 422940 - 423443 | 18180.8 |
| topoisomerase ii | C3433_01955 | Not Available | Negative | 423470 - 424300 | 30690.8 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | C3433_01960 | Not Available | Negative | 424466 - 425224 | 28943.9 |
| ribonuclease e inhibitor rrab | C3433_01965 | Not Available | Negative | 425276 - 425701 | 15962.8 |
| ornithine carbamoyltransferase | C3433_01970 | Not Available | Positive | 425865 - 426869 | 36776.0 |
| yhch/yjgk/yial family protein | C3433_01985 | Not Available | Negative | 427359 - 427811 | 16781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

