Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | C3433_01880 | Not Available | Positive | 405618 - 406637 | 36318.8 |
| gluconate kinase | C3433_01885 | Not Available | Negative | 406668 - 407189 | 19427.2 |
| l-idonate 5-dehydrogenase | C3433_01890 | Not Available | Positive | 407407 - 408456 | 37881.6 |
| gluconate 5-dehydrogenase | C3433_01895 | Not Available | Positive | 408461 - 409225 | 27642.3 |
| gluconate permease | C3433_01900 | Not Available | Positive | 409349 - 410668 | 45949.1 |
| transcriptional regulator | C3433_01905 | Not Available | Positive | 410721 - 411719 | 37655.5 |
| hypothetical protein | C3433_01910 | Not Available | Positive | 411799 - 413301 | 54286.3 |
| lipopolysaccharide abc transporter permease lptg | C3433_01915 | Not Available | Negative | 414036 - 415118 | 39514.9 |
| lps export abc transporter permease lptf | C3433_01920 | Not Available | Negative | 415118 - 416218 | 40514.5 |
| hypothetical protein | C3433_01925 | Not Available | Positive | 416181 - 416375 | 7274.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

