Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | C3433_01660 | Not Available | Positive | 357614 - 357880 | 10044.0 |
| hypothetical protein | C3433_01665 | Not Available | Positive | 357906 - 358448 | 20775.4 |
| secretoglobin family protein | C3433_01670 | Not Available | Positive | 358572 - 359105 | 19989.5 |
| cupin domain-containing protein | C3433_01690 | Not Available | Negative | 361734 - 362084 | 12892.3 |
| autoinducer-2 kinase | C3433_01695 | Not Available | Negative | 362097 - 363689 | 57528.2 |
| transcriptional regulator lsrr | C3433_01700 | Not Available | Negative | 363797 - 364753 | 33967.4 |
| autoinducer 2 abc transporter atp-binding protein lsra | C3433_01705 | Not Available | Positive | 365009 - 366556 | 55616.0 |
| autoinducer 2 abc transporter permease lsrc | C3433_01710 | Not Available | Positive | 366550 - 367599 | 37135.1 |
| autoinducer 2 abc transporter permease lsrd | C3433_01715 | Not Available | Positive | 367599 - 368597 | 34669.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | C3433_01720 | Not Available | Positive | 368624 - 369646 | 36607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

