Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_27080 | Not Available | Negative | 5488015 - 5489076 | 37031.8 |
| fimbrial biogenesis outer membrane usher protein | C3433_27085 | Not Available | Negative | 5489081 - 5491594 | 89370.8 |
| pilus assembly protein papd | C3433_27090 | Not Available | Negative | 5491611 - 5492321 | 25325.4 |
| type 1 fimbrial protein | C3433_27095 | Not Available | Negative | 5492526 - 5493077 | 17954.9 |
| diguanylate cyclase | C3433_27100 | Not Available | Negative | 5493909 - 5494889 | 33968.0 |
| lysr family transcriptional regulator | C3433_27105 | Not Available | Positive | 5495114 - 5496007 | 33404.5 |
| hypothetical protein | C3433_27110 | Not Available | Negative | 5496105 - 5496713 | 23429.4 |
| hypothetical protein | C3433_27115 | Not Available | Negative | 5496955 - 5497278 | 11826.6 |
| isncy family transposase | C3433_27120 | Not Available | Positive | 5497259 - 5498219 | 35971.4 |
| Trna-ile | Not Available | Not Available | Positive | 5498579 - 5498655 | Not Available |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

