Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | C3433_26965 | Not Available | Negative | 5471388 - 5472335 | 33988.4 |
| peptide deformylase | C3433_26970 | Not Available | Negative | 5472350 - 5472859 | 19286.4 |
| duf494 domain-containing protein | C3433_26980 | Not Available | Positive | 5474085 - 5474558 | 18453.1 |
| hypothetical protein | C3433_26985 | Not Available | Positive | 5474585 - 5475127 | 20003.2 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C3433_26990 | Not Available | Positive | 5475132 - 5475704 | 20523.5 |
| shikimate dehydrogenase | C3433_26995 | Not Available | Positive | 5475706 - 5476527 | 29397.2 |
| duf1488 domain-containing protein | C3433_27000 | Not Available | Positive | 5476524 - 5476781 | 9849.45 |
| gamma carbonic anhydrase family protein | C3433_27005 | Not Available | Negative | 5476757 - 5477311 | 20054.1 |
| isncy family transposase | C3433_27015 | Not Available | Positive | 5477830 - 5477932 | 3714.67 |
| merr family transcriptional regulator | C3433_27025 | Not Available | Positive | 5478725 - 5479534 | 31387.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

