Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid maintenance protein ccdb | C3433_26530 | Not Available | Negative | 5411446 - 5411769 | 12484.9 |
| post-segregation antitoxin ccda | C3433_26535 | Not Available | Negative | 5411769 - 5412017 | 9236.99 |
| conjugal transfer protein trba | C3433_26545 | Not Available | Positive | 5413853 - 5415025 | 43902.8 |
| hypothetical protein | C3433_26550 | Not Available | Positive | 5415159 - 5416181 | 37256.9 |
| conjugal transfer protein trbc | C3433_26555 | Not Available | Positive | 5416168 - 5418363 | 82777.9 |
| phospholipase d family protein | C3433_26560 | Not Available | Positive | 5418422 - 5418961 | 19639.6 |
| hypothetical protein | C3433_26565 | Not Available | Positive | 5419063 - 5419755 | 26535.5 |
| hypothetical protein | C3433_26570 | Not Available | Positive | 5419739 - 5420047 | 11787.9 |
| hypothetical protein | C3433_26575 | Not Available | Positive | 5420191 - 5420766 | 21724.2 |
| isncy family transposase | C3433_26580 | Not Available | Positive | 5420865 - 5421806 | 35294.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

