Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | C3433_26355 | Not Available | Negative | 5377633 - 5379531 | 70826.1 |
| sigma d regulator | C3433_26360 | Not Available | Negative | 5379788 - 5380276 | 18739.5 |
| nad(+) diphosphatase | C3433_26365 | Not Available | Positive | 5380373 - 5381146 | 29610.5 |
| uroporphyrinogen decarboxylase | C3433_26370 | Not Available | Positive | 5381197 - 5382261 | 39234.5 |
| deoxyribonuclease v | C3433_26375 | Not Available | Positive | 5382261 - 5382941 | 24724.2 |
| duf416 domain-containing protein | C3433_26380 | Not Available | Positive | 5382975 - 5383565 | 22675.0 |
| dna-binding protein hu-alpha | C3433_26385 | Not Available | Positive | 5383752 - 5384024 | 9521.48 |
| duf1481 domain-containing protein | C3433_26390 | Not Available | Positive | 5384036 - 5384728 | 26385.9 |
| zinc resistance-associated protein zrap | C3433_26395 | Not Available | Negative | 5384766 - 5385209 | 15783.7 |
| two-component system sensor histidine kinase zras | C3433_26400 | Not Available | Positive | 5385473 - 5386858 | 50724.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

