Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 5357920 - 5357994 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5358000 - 5358075 | Not Available |
| elongation factor tu | C3433_26255 | Not Available | Positive | 5358194 - 5358577 | 13619.2 |
| protein translocase subunit sece | C3433_26265 | Not Available | Positive | 5359670 - 5360053 | 13662.3 |
| transcription termination/antitermination protein nusg | C3433_26270 | Not Available | Positive | 5360055 - 5360600 | 20538.8 |
| 50s ribosomal protein l11 | C3433_26275 | Not Available | Positive | 5360756 - 5361184 | 14910.3 |
| 50s ribosomal protein l1 | C3433_26280 | Not Available | Positive | 5361188 - 5361895 | 24777.1 |
| hypothetical protein | C3433_26285 | Not Available | Negative | 5361822 - 5362064 | 9206.07 |
| 50s ribosomal protein l10 | C3433_26295 | Not Available | Positive | 5362314 - 5362811 | 17791.7 |
| 50s ribosomal protein l7/l12 | C3433_26300 | Not Available | Positive | 5362878 - 5363243 | 12299.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

