Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | C3433_26130 | Not Available | Positive | 5340624 - 5341817 | 42112.0 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | C3433_26135 | Not Available | Positive | 5341840 - 5344989 | 113447.0 |
| hha toxicity attenuator | C3433_26140 | Not Available | Positive | 5345480 - 5345854 | 14400.9 |
| transcriptional regulator | C3433_26145 | Not Available | Positive | 5345882 - 5346100 | 8628.46 |
| maltose o-acetyltransferase | C3433_26150 | Not Available | Positive | 5346281 - 5346844 | 20608.7 |
| hypothetical protein | C3433_26155 | Not Available | Positive | 5346949 - 5347419 | 18379.2 |
| 50s ribosomal protein l36 | C3433_26160 | Not Available | Negative | 5347499 - 5347639 | 5493.94 |
| type b 50s ribosomal protein l31 | C3433_26165 | Not Available | Negative | 5347641 - 5347901 | 9987.7 |
| hypothetical protein | C3433_26170 | Not Available | Positive | 5348090 - 5349643 | 58584.5 |
| duf1428 domain-containing protein | C3433_26175 | Not Available | Negative | 5349695 - 5350048 | 13251.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

