Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator alls | C3433_25925 | Not Available | Positive | 5297187 - 5298113 | 34210.3 |
| trna 2-selenouridine(34) synthase mnmh | C3433_25930 | Not Available | Positive | 5298183 - 5299277 | 41315.3 |
| abc transporter permease | C3433_25935 | Not Available | Negative | 5299278 - 5299937 | 23701.7 |
| virulence-associated abc transporter atp-binding protein sfbb | C3433_25940 | Not Available | Negative | 5299930 - 5300946 | 36438.6 |
| metal abc transporter substrate-binding protein | C3433_25945 | Not Available | Negative | 5301009 - 5301839 | 29939.1 |
| porin | C3433_25950 | Not Available | Negative | 5302101 - 5303234 | 42567.4 |
| abc transporter permease | C3433_25955 | Not Available | Negative | 5303422 - 5305836 | 89316.4 |
| abc transporter atp-binding protein | C3433_25960 | Not Available | Negative | 5305833 - 5306519 | 24583.5 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | C3433_25965 | Not Available | Positive | 5306487 - 5307104 | 23287.1 |
| oxidoreductase | C3433_25970 | Not Available | Positive | 5307268 - 5308038 | 28037.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

