Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C3433_25770 | Not Available | Positive | 5260323 - 5261237 | 32108.3 |
| laci family transcriptional regulator | C3433_25775 | Not Available | Positive | 5261245 - 5262225 | 35901.6 |
| acetyl-coa c-acyltransferase fada | C3433_25780 | Not Available | Negative | 5262380 - 5263543 | 40992.8 |
| fatty acid oxidation complex subunit alpha fadb | C3433_25785 | Not Available | Negative | 5263553 - 5265742 | 79562.5 |
| xaa-pro dipeptidase | C3433_25790 | Not Available | Positive | 5265931 - 5267262 | 50213.8 |
| yigz family protein | C3433_25795 | Not Available | Positive | 5267262 - 5267876 | 21709.0 |
| trk system potassium transporter trkh | C3433_25800 | Not Available | Positive | 5267915 - 5269366 | 52758.6 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C3433_25805 | Not Available | Positive | 5269378 - 5269923 | 20879.0 |
| hypothetical protein | C3433_25815 | Not Available | Negative | 5270423 - 5273764 | 117493.0 |
| hypothetical protein | C3433_25820 | Not Available | Negative | 5273893 - 5274147 | 9488.82 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

