Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | C3433_25720 | Not Available | Positive | 5251644 - 5252399 | 28041.7 |
| ubiquinone biosynthesis protein ubij | C3433_25725 | Not Available | Positive | 5252413 - 5253018 | 22264.9 |
| ubiquinone biosynthesis regulatory protein kinase ubib | C3433_25730 | Not Available | Positive | 5253015 - 5254655 | 63426.5 |
| sec-independent protein translocase protein tata | C3433_25735 | Not Available | Positive | 5254734 - 5254988 | 9026.87 |
| twin-arginine translocase subunit tatb | C3433_25740 | Not Available | Positive | 5254992 - 5255540 | 19623.1 |
| twin-arginine translocase subunit tatc | C3433_25745 | Not Available | Positive | 5255543 - 5256334 | 29421.6 |
| 3'-5' ssdna/rna exonuclease tatd | C3433_25750 | Not Available | Positive | 5256376 - 5257158 | 29493.0 |
| transcription/translation regulatory transformer protein rfah | C3433_25755 | Not Available | Negative | 5257164 - 5257652 | 18270.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C3433_25760 | Not Available | Positive | 5257857 - 5259350 | 55747.0 |
| nad(p)h-flavin reductase | C3433_25765 | Not Available | Positive | 5259391 - 5260092 | 26418.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

