Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine export protein rhtc | C3433_25665 | Not Available | Positive | 5239439 - 5240059 | 22494.3 |
| homoserine/homoserine lactone efflux protein | C3433_25675 | Not Available | Negative | 5241153 - 5241773 | 22273.8 |
| lysophospholipase | C3433_25680 | Not Available | Positive | 5241884 - 5242900 | 38874.2 |
| sugar/pyridoxal phosphate phosphatase yigl | C3433_25685 | Not Available | Positive | 5242916 - 5243716 | 29593.2 |
| eama family transporter | C3433_25690 | Not Available | Positive | 5243797 - 5244696 | 33483.7 |
| hth-type transcriptional regulator metr | C3433_25695 | Not Available | Negative | 5244584 - 5245537 | 35731.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | C3433_25700 | Not Available | Positive | 5245786 - 5248047 | 84396.6 |
| carboxymethylenebutenolidase | C3433_25705 | Not Available | Negative | 5248144 - 5248950 | 29152.3 |
| uridine phosphorylase | C3433_25710 | Not Available | Positive | 5249216 - 5249977 | 27116.6 |
| dna recombination protein rmuc | C3433_25715 | Not Available | Positive | 5250119 - 5251549 | 54714.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

