Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 family protein | C3433_25615 | Not Available | Positive | 5228811 - 5229518 | 26845.7 |
| tyrosine recombinase xerc | C3433_25620 | Not Available | Positive | 5229515 - 5230417 | 33644.6 |
| flavin mononucleotide phosphatase | C3433_25625 | Not Available | Positive | 5230417 - 5231133 | 26740.0 |
| dna helicase ii | C3433_25630 | Not Available | Positive | 5231222 - 5233384 | 82058.8 |
| magnesium/nickel/cobalt transporter cora | C3433_25635 | Not Available | Positive | 5233861 - 5234811 | 36735.9 |
| eama family transporter rard | C3433_25640 | Not Available | Negative | 5234885 - 5235778 | 33234.0 |
| 4hbt family thioesterase yigi | C3433_25645 | Not Available | Negative | 5235830 - 5236297 | 17135.7 |
| hypothetical protein | C3433_25650 | Not Available | Positive | 5236338 - 5236544 | 8063.05 |
| phospholipase a | C3433_25655 | Not Available | Positive | 5236587 - 5237456 | 33026.7 |
| atp-dependent dna helicase recq | C3433_25660 | Not Available | Positive | 5237545 - 5239374 | 68484.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

