Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 5219387 - 5219472 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 5219514 - 5219590 | Not Available |
| protoheme ix biogenesis protein hemy | C3433_25575 | Not Available | Negative | 5220172 - 5221371 | 45362.8 |
| uroporphyrinogen-iii c-methyltransferase | C3433_25580 | Not Available | Negative | 5221374 - 5222561 | 42940.2 |
| uroporphyrinogen-iii synthase | C3433_25585 | Not Available | Negative | 5222583 - 5223323 | 27567.1 |
| hydroxymethylbilane synthase | C3433_25590 | Not Available | Negative | 5223320 - 5224276 | 34286.6 |
| class i adenylate cyclase | C3433_25595 | Not Available | Positive | 5224657 - 5227203 | 97302.9 |
| iron donor protein cyay | C3433_25600 | Not Available | Negative | 5227279 - 5227599 | 12193.0 |
| hypothetical protein | C3433_25605 | Not Available | Positive | 5227738 - 5227941 | 7175.62 |
| diaminopimelate epimerase | C3433_25610 | Not Available | Positive | 5227990 - 5228814 | 30257.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

