Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | C3433_25515 | Not Available | Positive | 5210300 - 5211181 | 32810.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | C3433_25520 | Not Available | Positive | 5211159 - 5211836 | 24683.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | C3433_25525 | Not Available | Positive | 5211841 - 5212971 | 42112.6 |
| lipid iii flippase wzxe | C3433_25530 | Not Available | Positive | 5212973 - 5214223 | 44877.1 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | C3433_25535 | Not Available | Positive | 5214220 - 5215299 | 40496.5 |
| o-antigen assembly polymerase | C3433_25540 | Not Available | Positive | 5215296 - 5216651 | 51736.6 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | C3433_25545 | Not Available | Positive | 5216651 - 5217391 | 27897.7 |
| amino acid permease | C3433_25550 | Not Available | Positive | 5217670 - 5219055 | 50364.0 |
| Trna-arg | Not Available | Not Available | Positive | 5219158 - 5219234 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 5219291 - 5219366 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

