Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | C3433_25465 | Not Available | Negative | 5199522 - 5201006 | 55199.0 |
| atp-dependent rna helicase rhlb | C3433_25470 | Not Available | Negative | 5201015 - 5202283 | 47139.6 |
| thiol reductase thioredoxin | C3433_25475 | Not Available | Positive | 5202427 - 5202756 | 11807.2 |
| rho operon leader peptide | C3433_25480 | Not Available | Positive | 5202887 - 5203006 | 4338.2 |
| transcription termination factor rho | C3433_25485 | Not Available | Positive | 5203094 - 5204353 | 47009.0 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | C3433_25490 | Not Available | Positive | 5204592 - 5205695 | 41068.0 |
| eca polysaccharide chain length modulation protein | C3433_25495 | Not Available | Positive | 5205708 - 5206754 | 39549.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C3433_25500 | Not Available | Positive | 5206810 - 5207940 | 42123.7 |
| udp-n-acetyl-d-mannosamine dehydrogenase | C3433_25505 | Not Available | Positive | 5207937 - 5209199 | 45528.9 |
| dtdp-glucose 4,6-dehydratase | C3433_25510 | Not Available | Positive | 5209199 - 5210266 | 39771.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

