Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 2 catalytic subunit | C3433_25415 | Not Available | Positive | 5186723 - 5188369 | 59156.3 |
| acetolactate synthase 2 small subunit | C3433_25420 | Not Available | Positive | 5188366 - 5188629 | 9724.75 |
| branched-chain amino acid transaminase | C3433_25425 | Not Available | Positive | 5188647 - 5189576 | 34131.6 |
| dihydroxy-acid dehydratase | C3433_25430 | Not Available | Positive | 5189637 - 5191487 | 65697.7 |
| threonine ammonia-lyase, biosynthetic | C3433_25435 | Not Available | Positive | 5191493 - 5193037 | 56140.4 |
| enoyl-[acyl-carrier-protein] reductase fabv | C3433_25440 | Not Available | Negative | 5193103 - 5194296 | 43363.6 |
| hth-type transcriptional activator ilvy | C3433_25445 | Not Available | Negative | 5194472 - 5195374 | 33456.6 |
| ketol-acid reductoisomerase | C3433_25450 | Not Available | Positive | 5195531 - 5197006 | 53948.0 |
| peptidyl-prolyl cis-trans isomerase | C3433_25455 | Not Available | Negative | 5197094 - 5197375 | 10218.6 |
| dna helicase rep | C3433_25460 | Not Available | Positive | 5197460 - 5199481 | 77105.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

