Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | C3433_25195 | Not Available | Positive | 5141854 - 5142066 | 7857.43 |
| hypothetical protein | C3433_25200 | Not Available | Positive | 5142406 - 5143086 | 26734.7 |
| mfs transporter | C3433_25205 | Not Available | Positive | 5143176 - 5144600 | 52257.6 |
| met repressor | C3433_25210 | Not Available | Negative | 5144654 - 5144971 | 12194.5 |
| cystathionine gamma-synthase | C3433_25215 | Not Available | Positive | 5145237 - 5146397 | 41491.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C3433_25220 | Not Available | Positive | 5146400 - 5148832 | 88769.8 |
| 4-carboxymuconolactone decarboxylase | C3433_25225 | Not Available | Negative | 5148941 - 5149318 | 13309.2 |
| lysr family transcriptional regulator | C3433_25230 | Not Available | Positive | 5149409 - 5150317 | 34081.8 |
| hypothetical protein | C3433_25235 | Not Available | Negative | 5150304 - 5150489 | 6986.75 |
| 5,10-methylenetetrahydrofolate reductase | C3433_25240 | Not Available | Positive | 5150475 - 5151362 | 33038.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

