Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | C3433_24940 | Not Available | Negative | 5092423 - 5095473 | 112055.0 |
| sulfurtransferase fdhd | C3433_24950 | Not Available | Positive | 5095668 - 5096504 | 30335.6 |
| hypothetical protein | C3433_24955 | Not Available | Negative | 5096471 - 5096977 | 18601.4 |
| cyclic nucleotide-binding protein | C3433_24960 | Not Available | Negative | 5097036 - 5097557 | 20164.1 |
| duf1471 domain-containing protein | C3433_24965 | Not Available | Positive | 5097687 - 5097899 | 7297.71 |
| branched-chain amino acid transport | C3433_24970 | Not Available | Negative | 5097942 - 5098265 | 11289.3 |
| branched-chain amino acid abc transporter permease | C3433_24975 | Not Available | Negative | 5098265 - 5098924 | 22732.5 |
| xre family transcriptional regulator | C3433_24980 | Not Available | Positive | 5099026 - 5099574 | 19800.9 |
| l-rhamnose mutarotase | C3433_24985 | Not Available | Negative | 5099632 - 5099946 | 12298.6 |
| lactaldehyde reductase | C3433_24990 | Not Available | Negative | 5099943 - 5101091 | 40256.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

