Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lyxose/d-mannose family sugar isomerase | C3433_24505 | Not Available | Negative | 5010210 - 5010893 | 25796.4 |
| transcriptional regulator | C3433_24510 | Not Available | Negative | 5011014 - 5011955 | 32801.6 |
| ribose abc transporter permease | C3433_24515 | Not Available | Negative | 5012029 - 5013024 | 34654.6 |
| sugar abc transporter atp-binding protein | C3433_24520 | Not Available | Negative | 5013017 - 5014540 | 55639.0 |
| histidine kinase | C3433_24525 | Not Available | Positive | 5014546 - 5014653 | 3704.54 |
| hybrid sensor histidine kinase/response regulator | C3433_24530 | Not Available | Positive | 5014655 - 5016919 | 82563.5 |
| hypothetical protein | C3433_24535 | Not Available | Positive | 5016989 - 5017318 | 13451.3 |
| hypothetical protein | C3433_24540 | Not Available | Positive | 5017474 - 5017776 | 11861.1 |
| addiction module antidote protein, higa family | C3433_24545 | Not Available | Positive | 5017803 - 5018144 | 13060.6 |
| phosphonate metabolism protein phnp | C3433_24550 | Not Available | Negative | 5018197 - 5018955 | 27874.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

