Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein ssb1 | C3433_24345 | Not Available | Positive | 4980355 - 4980879 | 18622.8 |
| hypothetical protein | C3433_24350 | Not Available | Negative | 4980946 - 4981227 | 10258.9 |
| hypothetical protein | C3433_24355 | Not Available | Positive | 4981779 - 4983365 | 60479.2 |
| dna-binding transcriptional regulator soxs | C3433_24360 | Not Available | Negative | 4983368 - 4983691 | 12977.7 |
| redox-sensitive transcriptional activator soxr | C3433_24365 | Not Available | Positive | 4983778 - 4984236 | 16881.4 |
| hypothetical protein | C3433_24370 | Not Available | Negative | 4984336 - 4984563 | 8820.61 |
| ncs2 family permease | C3433_24380 | Not Available | Positive | 4984818 - 4986167 | 45741.5 |
| na+/h+ antiporter | C3433_24390 | Not Available | Positive | 4986325 - 4987971 | 60365.2 |
| transposase | C3433_24395 | Not Available | Positive | 4988106 - 4988597 | 19712.3 |
| lysr family transcriptional regulator | C3433_24400 | Not Available | Negative | 4988805 - 4989695 | 33388.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

