Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_24030 | Not Available | Positive | 4904628 - 4905455 | 29962.7 |
| hypothetical protein | C3433_24035 | Not Available | Positive | 4905532 - 4905669 | 4999.05 |
| isl3 family transposase | C3433_24040 | Not Available | Positive | 4905852 - 4907471 | 61698.8 |
| isncy family transposase | C3433_24050 | Not Available | Negative | 4908358 - 4909755 | 53786.3 |
| hypothetical protein | C3433_24055 | Not Available | Positive | 4911117 - 4911719 | 23299.3 |
| hypothetical protein | C3433_24060 | Not Available | Positive | 4912189 - 4912797 | 20772.0 |
| invasin | C3433_24065 | Not Available | Positive | 4912876 - 4914915 | 74835.9 |
| hypothetical protein | C3433_24070 | Not Available | Positive | 4916348 - 4917457 | 40418.3 |
| hypothetical protein | C3433_24075 | Not Available | Negative | 4917700 - 4917885 | 6875.39 |
| transposase | C3433_24080 | Not Available | Negative | 4917983 - 4919329 | 51822.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

