Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_23855 | Not Available | Negative | 4874146 - 4875051 | 34337.4 |
| short-chain dehydrogenase | C3433_23860 | Not Available | Negative | 4875120 - 4875863 | 26958.3 |
| homoserine o-acetyltransferase | C3433_23865 | Not Available | Negative | 4875897 - 4877018 | 41187.3 |
| cysteine synthase a | C3433_23870 | Not Available | Negative | 4877088 - 4878044 | 34284.0 |
| diaminopimelate epimerase | C3433_23875 | Not Available | Negative | 4878028 - 4878852 | 29640.7 |
| arginase | C3433_23880 | Not Available | Negative | 4878928 - 4879755 | 30346.3 |
| mfs transporter | C3433_23885 | Not Available | Negative | 4879886 - 4881052 | 41010.4 |
| hypothetical protein | C3433_23895 | Not Available | Positive | 4881807 - 4882439 | 23848.4 |
| hypothetical protein | C3433_23900 | Not Available | Positive | 4882599 - 4883081 | 18381.8 |
| conjugal transfer protein trax | C3433_23905 | Not Available | Negative | 4883200 - 4883973 | 28678.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

