Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_23800 | Not Available | Positive | 4858597 - 4859154 | 20367.7 |
| complement resistance protein trat | C3433_23805 | Not Available | Positive | 4859456 - 4860187 | 25815.0 |
| cytotoxic protein ccdb | C3433_23810 | Not Available | Negative | 4860194 - 4860505 | 12027.5 |
| post-segregation antitoxin ccda | C3433_23815 | Not Available | Negative | 4860502 - 4860750 | 9129.98 |
| type iv conjugative transfer system coupling protein trad | C3433_23820 | Not Available | Positive | 4860961 - 4863537 | 96750.4 |
| conjugative transfer relaxase/helicase trai | C3433_23825 | Not Available | Positive | 4863534 - 4868951 | 197876.0 |
| disulfide bond formation protein dsba | C3433_23830 | Not Available | Positive | 4868986 - 4869771 | 28794.6 |
| incfii family plasmid replication initiator repa | C3433_23835 | Not Available | Positive | 4870365 - 4871219 | 33133.3 |
| hypothetical protein | C3433_23840 | Not Available | Positive | 4872571 - 4872780 | 8275.07 |
| hypothetical protein | C3433_23850 | Not Available | Negative | 4873248 - 4874048 | 31084.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

