Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trab | C3433_23700 | Not Available | Positive | 4840196 - 4841605 | 49318.9 |
| hypothetical protein | C3433_23705 | Not Available | Positive | 4841614 - 4842114 | 19917.9 |
| type iv conjugative transfer system protein trav | C3433_23710 | Not Available | Positive | 4842196 - 4842753 | 19329.9 |
| hypothetical protein | C3433_23715 | Not Available | Positive | 4842750 - 4842935 | 7100.53 |
| type iv secretion system protein trac | C3433_23720 | Not Available | Positive | 4842932 - 4845535 | 97959.9 |
| type-f conjugative transfer system protein trbi | C3433_23725 | Not Available | Positive | 4845532 - 4845948 | 15275.4 |
| type-f conjugative transfer system protein traw | C3433_23730 | Not Available | Positive | 4845945 - 4846580 | 23477.1 |
| hypothetical protein | C3433_23735 | Not Available | Positive | 4846577 - 4846897 | 12360.9 |
| hypothetical protein | C3433_23740 | Not Available | Positive | 4846888 - 4847538 | 23750.5 |
| hypothetical protein | C3433_23745 | Not Available | Positive | 4847640 - 4847861 | 8150.86 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

