Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_23650 | Not Available | Positive | 4833584 - 4833892 | 11867.0 |
| hypothetical protein | C3433_23655 | Not Available | Positive | 4834592 - 4834885 | 10698.7 |
| hypothetical protein | C3433_23660 | Not Available | Positive | 4834897 - 4835718 | 31413.5 |
| lytic transglycosylase | C3433_23665 | Not Available | Negative | 4835752 - 4836282 | 19758.0 |
| conjugal transfer protein | C3433_23670 | Not Available | Positive | 4836936 - 4837328 | 14660.4 |
| dna-binding protein | C3433_23675 | Not Available | Negative | 4837360 - 4838001 | 24999.0 |
| conjugal transfer protein traa | C3433_23680 | Not Available | Positive | 4838199 - 4838552 | 12629.8 |
| type iv conjugative transfer system protein tral | C3433_23685 | Not Available | Positive | 4838555 - 4838857 | 11725.4 |
| conjugal transfer protein trae | C3433_23690 | Not Available | Positive | 4838863 - 4839447 | 21590.2 |
| type-f conjugative transfer system secretin trak | C3433_23695 | Not Available | Positive | 4839459 - 4840199 | 26879.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

