Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid-partitioning protein sopa | C3433_23425 | Not Available | Positive | 4801832 - 4802998 | 43584.3 |
| plasmid-partitioning protein | C3433_23430 | Not Available | Positive | 4802998 - 4803966 | 35477.2 |
| hypothetical protein | C3433_23435 | Not Available | Negative | 4804130 - 4805035 | 29113.2 |
| group ii intron reverse transcriptase/maturase | C3433_23445 | Not Available | Negative | 4806089 - 4807750 | 63361.0 |
| hypothetical protein | C3433_23450 | Not Available | Negative | 4807854 - 4808060 | 7786.41 |
| peptidase | C3433_23460 | Not Available | Negative | 4808856 - 4809278 | 15469.6 |
| hypothetical protein | C3433_23465 | Not Available | Positive | 4809818 - 4810756 | 35174.9 |
| hypothetical protein | C3433_23470 | Not Available | Positive | 4810789 - 4811136 | 13409.7 |
| dna methylase | C3433_23475 | Not Available | Positive | 4811511 - 4812191 | 25295.4 |
| hypothetical protein | C3433_23480 | Not Available | Positive | 4812191 - 4812412 | 8499.08 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

