Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_23360 | Not Available | Negative | 4793043 - 4793345 | 11711.4 |
| hypothetical protein | C3433_23365 | Not Available | Negative | 4793299 - 4793652 | 13005.0 |
| ion transporter | C3433_23370 | Not Available | Negative | 4793733 - 4794350 | 22807.6 |
| type ii toxin-antitoxin system pard family antitoxin | C3433_23380 | Not Available | Positive | 4795059 - 4795325 | 10081.9 |
| type ii toxin-antitoxin system rele/pare family toxin | C3433_23385 | Not Available | Positive | 4795312 - 4795608 | 11579.8 |
| transcriptional regulator | C3433_23390 | Not Available | Positive | 4795726 - 4795851 | 4908.9 |
| recombinase | C3433_23395 | Not Available | Positive | 4795972 - 4796712 | 28043.3 |
| repb family plasmid replication initiator protein | C3433_23400 | Not Available | Negative | 4797037 - 4798017 | 37093.8 |
| duf1778 domain-containing protein | C3433_23405 | Not Available | Positive | 4798919 - 4799188 | 10331.3 |
| n-acetyltransferase | C3433_23410 | Not Available | Positive | 4799192 - 4799722 | 20402.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

