Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein pefc | C3433_23300 | Not Available | Negative | 4780060 - 4782519 | 88298.7 |
| fimbrial protein pefa | C3433_23305 | Not Available | Negative | 4782625 - 4783155 | 17695.9 |
| transcriptional regulator | C3433_23310 | Not Available | Negative | 4783567 - 4783959 | 15239.5 |
| hypothetical protein | C3433_23320 | Not Available | Negative | 4784722 - 4785855 | 39751.1 |
| transcriptional regulator | C3433_23325 | Not Available | Positive | 4785962 - 4786255 | 10898.4 |
| hypothetical protein | C3433_23330 | Not Available | Positive | 4786402 - 4786608 | 7576.27 |
| hypothetical protein | C3433_23335 | Not Available | Negative | 4786702 - 4789515 | 97080.4 |
| autotransporter strand-loop-strand o-heptosyltransferase | C3433_23340 | Not Available | Negative | 4789463 - 4790647 | 45071.5 |
| transcriptional regulator | C3433_23345 | Not Available | Negative | 4790737 - 4791069 | 12729.5 |
| isncy family transposase | C3433_23355 | Not Available | Positive | 4792038 - 4792976 | 35563.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

