Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | C3433_23195 | Not Available | Positive | 4762498 - 4763538 | 37351.9 |
| phosphoenolpyruvate--protein phosphotransferase | C3433_23200 | Not Available | Positive | 4763562 - 4766057 | 92256.8 |
| hypothetical protein | C3433_23205 | Not Available | Negative | 4766135 - 4766323 | 7031.9 |
| cupin | C3433_23210 | Not Available | Positive | 4766478 - 4766861 | 13900.4 |
| arac family transcriptional regulator | C3433_23215 | Not Available | Negative | 4766899 - 4767762 | 32709.5 |
| dna-binding response regulator | C3433_23220 | Not Available | Negative | 4767778 - 4768512 | 28708.7 |
| sensor histidine kinase | C3433_23225 | Not Available | Negative | 4768527 - 4770224 | 62642.0 |
| alanine transaminase | C3433_23230 | Not Available | Positive | 4770612 - 4771850 | 46148.6 |
| membrane protein ypdk | C3433_23235 | Not Available | Negative | 4771917 - 4771988 | 2704.57 |
| hypothetical protein | C3433_23240 | Not Available | Positive | 4772332 - 4772946 | 22180.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

