Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | C3433_23145 | Not Available | Negative | 4751070 - 4752272 | 43455.4 |
| divalent metal cation transporter | C3433_23150 | Not Available | Positive | 4752617 - 4753855 | 44314.5 |
| duf2502 domain-containing protein | C3433_23155 | Not Available | Negative | 4753888 - 4754214 | 13254.3 |
| l-glyceraldehyde 3-phosphate reductase | C3433_23160 | Not Available | Negative | 4754352 - 4755341 | 36943.0 |
| indolepyruvate decarboxylase | C3433_23165 | Not Available | Positive | 4755524 - 4757176 | 60131.1 |
| ion channel protein | C3433_23170 | Not Available | Negative | 4757177 - 4758412 | 43110.8 |
| glucokinase | C3433_23175 | Not Available | Positive | 4758617 - 4759582 | 34466.7 |
| fructose-like phosphotransferase enzyme iib component 1 | C3433_23180 | Not Available | Positive | 4759801 - 4760127 | 11691.9 |
| pts fructose transporter subunit iic | C3433_23185 | Not Available | Positive | 4760148 - 4761395 | 44028.0 |
| aminopeptidase | C3433_23190 | Not Available | Positive | 4761413 - 4762498 | 39546.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

