Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase | C3433_22945 | Not Available | Positive | 4714864 - 4715763 | 33137.2 |
| argininosuccinate lyase | C3433_22950 | Not Available | Positive | 4716220 - 4717596 | 51888.5 |
| c4-dicarboxylate abc transporter | C3433_22955 | Not Available | Positive | 4717659 - 4718975 | 45972.9 |
| c4-dicarboxylate abc transporter | C3433_22960 | Not Available | Negative | 4719100 - 4720416 | 46342.2 |
| fadr family transcriptional regulator | C3433_22965 | Not Available | Positive | 4720561 - 4721217 | 25400.6 |
| oxidoreductase ucpa | C3433_22970 | Not Available | Positive | 4721392 - 4722183 | 27897.7 |
| sulfate abc transporter substrate-binding protein | C3433_22975 | Not Available | Positive | 4722488 - 4723504 | 37854.1 |
| molybdate abc transporter permease subunit | C3433_22980 | Not Available | Positive | 4723505 - 4724338 | 30332.6 |
| sulfate abc transporter permease subunit cysw | C3433_22985 | Not Available | Positive | 4724338 - 4725213 | 32370.3 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | C3433_22990 | Not Available | Positive | 4725203 - 4726300 | 40982.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

