Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase subunit eutb | C3433_22895 | Not Available | Positive | 4706600 - 4707961 | 49500.1 |
| ethanolamine ammonia lyase small subunit | C3433_22900 | Not Available | Positive | 4707982 - 4708878 | 32153.7 |
| ethanolamine utilization microcompartment protein eutl | C3433_22905 | Not Available | Positive | 4708888 - 4709547 | 22725.0 |
| ethanolamine utilization microcompartment protein eutk | C3433_22910 | Not Available | Positive | 4709559 - 4710089 | 19006.8 |
| hth-type transcriptional regulator eutr | C3433_22915 | Not Available | Positive | 4710138 - 4711190 | 40137.0 |
| oxygen-dependent coproporphyrinogen oxidase | C3433_22920 | Not Available | Negative | 4711290 - 4712189 | 34491.4 |
| n-acetylmuramoyl-l-alanine amidase amia | C3433_22925 | Not Available | Negative | 4712192 - 4713061 | 31379.8 |
| gnat family acetyltransferase | C3433_22930 | Not Available | Positive | 4713274 - 4713699 | 16366.6 |
| hypothetical protein | C3433_22935 | Not Available | Positive | 4713686 - 4714135 | 16975.2 |
| rpoe-regulated lipoprotein | C3433_22940 | Not Available | Positive | 4714195 - 4714770 | 20575.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

