Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside/multidrug transporter subunit acrd | C3433_22795 | Not Available | Negative | 4682392 - 4685505 | 112971.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | C3433_22800 | Not Available | Negative | 4685690 - 4687387 | 63373.3 |
| oxidoreductase fes-binding subunit | C3433_22805 | Not Available | Positive | 4687651 - 4689630 | 71792.0 |
| gdp-mannose pyrophosphatase nudk | C3433_22810 | Not Available | Positive | 4689787 - 4690362 | 21643.8 |
| duf1176 domain-containing protein | C3433_22815 | Not Available | Positive | 4690486 - 4691529 | 38634.5 |
| transketolase | C3433_22820 | Not Available | Negative | 4691612 - 4693606 | 72717.3 |
| hypothetical protein | C3433_22825 | Not Available | Negative | 4693652 - 4693867 | 7948.76 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | C3433_22830 | Not Available | Positive | 4693887 - 4696166 | 82174.0 |
| ethanolamine utilization protein euts | C3433_22835 | Not Available | Positive | 4696327 - 4696662 | 11673.4 |
| ethanolamine utilization protein eutp | C3433_22840 | Not Available | Positive | 4696675 - 4697154 | 17795.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

