Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil permease | C3433_22695 | Not Available | Positive | 4664389 - 4665678 | 45124.1 |
| dnaa inactivator hda | C3433_22700 | Not Available | Positive | 4665750 - 4666475 | 27447.2 |
| arsenate reductase (glutaredoxin) | C3433_22705 | Not Available | Negative | 4666511 - 4666870 | 13404.4 |
| beta-barrel assembly-enhancing protease | C3433_22710 | Not Available | Negative | 4666994 - 4668457 | 53905.1 |
| ai-2e family transporter | C3433_22715 | Not Available | Positive | 4668684 - 4669748 | 39346.0 |
| hypothetical protein | C3433_22720 | Not Available | Positive | 4669915 - 4670574 | 23418.7 |
| hypothetical protein | C3433_22725 | Not Available | Positive | 4670576 - 4671037 | 16024.4 |
| beta-aspartyl-peptidase | C3433_22730 | Not Available | Positive | 4671049 - 4672212 | 40982.3 |
| thioredoxin-dependent thiol peroxidase | C3433_22735 | Not Available | Negative | 4672320 - 4672790 | 17629.8 |
| glycine cleavage system transcriptional repressor | C3433_22740 | Not Available | Negative | 4672790 - 4673428 | 23239.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

