Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_22645 | Not Available | Negative | 4651285 - 4651953 | 24847.9 |
| mechanosensitive ion channel protein mscs | C3433_22650 | Not Available | Negative | 4652203 - 4653081 | 32295.6 |
| duf2633 domain-containing protein | C3433_22655 | Not Available | Negative | 4653448 - 4653651 | 7986.7 |
| sensor domain-containing phosphodiesterase | C3433_22660 | Not Available | Positive | 4654003 - 4656273 | 86296.1 |
| exopolyphosphatase | C3433_22665 | Not Available | Negative | 4656253 - 4657794 | 58039.0 |
| polyphosphate kinase 1 | C3433_22670 | Not Available | Negative | 4657799 - 4659865 | 80426.0 |
| phosphoribosylglycinamide formyltransferase | C3433_22675 | Not Available | Negative | 4660081 - 4660722 | 23597.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | C3433_22680 | Not Available | Negative | 4660719 - 4661756 | 36904.2 |
| 6-phospho-beta-glucosidase | C3433_22685 | Not Available | Positive | 4662052 - 4663482 | 54506.4 |
| uracil phosphoribosyltransferase | C3433_22690 | Not Available | Positive | 4663666 - 4664292 | 22462.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

