Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase | C3433_22445 | Not Available | Negative | 4597059 - 4598567 | 55573.5 |
| laci family transcriptional regulator | C3433_22450 | Not Available | Negative | 4598671 - 4599654 | 35524.0 |
| duf1007 domain-containing protein | C3433_22455 | Not Available | Positive | 4600072 - 4600710 | 23898.4 |
| nickel transporter | C3433_22460 | Not Available | Positive | 4600701 - 4601681 | 35317.4 |
| inositol-1-monophosphatase | C3433_22465 | Not Available | Negative | 4601785 - 4602588 | 29134.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | C3433_22470 | Not Available | Positive | 4602707 - 4603438 | 26693.2 |
| fe-s cluster assembly transcriptional regulator iscr | C3433_22475 | Not Available | Positive | 4603678 - 4604169 | 17421.7 |
| iscs subfamily cysteine desulfurase | C3433_22480 | Not Available | Positive | 4604354 - 4605568 | 45024.1 |
| fe-s cluster assembly scaffold iscu | C3433_22485 | Not Available | Positive | 4605595 - 4605981 | 13807.3 |
| iron-sulfur cluster assembly accessory protein | C3433_22490 | Not Available | Positive | 4606002 - 4606325 | 11502.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

