Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | C3433_22390 | Not Available | Negative | 4582575 - 4583768 | 44067.4 |
| duf5107 domain-containing protein | C3433_22395 | Not Available | Positive | 4583883 - 4587149 | 122948.0 |
| mfs transporter | C3433_22400 | Not Available | Positive | 4587222 - 4588661 | 51642.2 |
| aldose 1-epimerase | C3433_22405 | Not Available | Positive | 4588661 - 4589503 | 31440.5 |
| 3-phenylpropionate mfs transporter | C3433_22410 | Not Available | Positive | 4589592 - 4590740 | 41796.1 |
| stationary phase inducible protein csie | C3433_22415 | Not Available | Negative | 4590735 - 4592012 | 48731.1 |
| phosphosugar isomerase | C3433_22425 | Not Available | Negative | 4592871 - 4593470 | 20941.3 |
| ribulokinase | C3433_22430 | Not Available | Negative | 4593467 - 4595104 | 59815.5 |
| abc transporter permease | C3433_22435 | Not Available | Negative | 4595122 - 4596075 | 32926.9 |
| abc transporter permease | C3433_22440 | Not Available | Negative | 4596077 - 4597066 | 35148.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

