Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | C3433_22340 | Not Available | Positive | 4574021 - 4574359 | 12430.2 |
| no-inducible flavohemoprotein | C3433_22345 | Not Available | Negative | 4574461 - 4575651 | 43666.8 |
| hypothetical protein | C3433_22350 | Not Available | Positive | 4575714 - 4575959 | 9627.05 |
| serine hydroxymethyltransferase | C3433_22355 | Not Available | Positive | 4575978 - 4577231 | 45556.5 |
| phenoxybenzoate dioxygenase | C3433_22360 | Not Available | Negative | 4577324 - 4578526 | 43450.5 |
| 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | C3433_22365 | Not Available | Negative | 4578537 - 4579349 | 28567.3 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | C3433_22370 | Not Available | Negative | 4579349 - 4579666 | 11166.1 |
| 3-phenylpropionate dioxygenase | C3433_22375 | Not Available | Negative | 4579666 - 4580184 | 20459.4 |
| 3-phenylpropionate dioxygenase | C3433_22380 | Not Available | Negative | 4580181 - 4581542 | 51194.8 |
| transcriptional regulator | C3433_22385 | Not Available | Positive | 4581678 - 4582571 | 32851.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

